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ABOUT THIS RECORD
ID:
MNEST000556
species:
Elaeis guineensis
miRNA family:
MIR397
source:
miRNEST
Taxonomy by NCBI:
Elaeis guineensis
Elaeis
Elaeidinae
Cocoseae
Arecoideae
Arecaceae
Arecales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATCGAGTGCAGCGTTGATGAG
miRNA*
CGCCAGCGCTGCATTCGATAA
mismatches:
1
bulges:
0
View larger
pre-miRNA
CATC
ATCGAGTGCAGCGTTGATGAG
CTCCTATTACCGTATTTCGCTGGCTGTATCAAAAGTTCTGTCTCCTGCGCAGCGACTGTGAGGATTT
CGCCAGCG
CTGCATTCGATAA
T
dot-bracket secondary structure
....
((((((((((((((((.((((
.((((..(((......((((((((.....((.......))......)).))))))..))))))).))
)).)))))
)))))))))))..
.
SIMILARITIES
miRBase
sbi-MIR397
:
0.0003
PMRD
vvi-miR397b
:
0.0003
microPC
no hits
UniProt
no hits
RFAM
MIR397: 0.0004
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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