ABOUT THIS RECORDspecies: Elaeis guineensis
miRNA family: MIR854
source: miRNEST
Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GATGAGGAGAGGGAGGAGGAG miRNA* CTTTTATTTTCTCCTCTATA mismatches: 4 bulges: 0 |
pre-miRNA
TGGATGAGGAGAGGGAGGAGGAGGAGGTGGACATCTTCTTCAGGCGAGGGCTCTGGTCTCTTTTATATCACTGTAATTACACCAATCTCCTTTAAAACTT
CTTCCAGGATCGGAAGAAGAAGGAGTGAAAATTTCCTCTTTTCTTTTATTTTCTCCTCTATA
dot-bracket secondary structure
.....((((((((((.(((((((((((.(((.((.(((....(((....))).((((.....(((((....)))))....))))..((((((.....(((
(((((......)))))))))))))).))).)).)))))))))))))).))))))))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGATGAGGAGAGGGAGGAGGAGGAGGTGGACATCTTCTTCAGGCGAGGGCTCTGGTCTCTTTTATATCACTGTAATTACACCAATCTCCTTTAAAACTT
CTTCCAGGATCGGAAGAAGAAGGAGTGAAAATTTCCTCTTTTCTTTTATTTTCTCCTCTATA
dot-bracket secondary structure
.....((((((((((.(((((((((((.(((.((.(((....(((....))).((((.....(((((....)))))....))))..((((((.....(((
(((((......)))))))))))))).))).)).)))))))))))))).))))))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
