ABOUT THIS RECORDspecies: Eragrostis curvula
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Eragrostis curvula Eragrostis Eragrostidinae Eragrostideae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCCGTCCCTAAATATAGGGC miRNA* TCTATACAAAAGGACGGAGGG mismatches: 5 bulges: 0 |
pre-miRNA
CGTACATACCCCTCCGTCCCTAAATATAGGGCCTTTTAACATTCAAATACAGAAATAGTCAATGTGTTAAAGACTACCATACCCTTCATTTTTACCTCAA
CCCATCACTCTACCAACCCTCCCACTTACCATAAAGTTTGTCTCATCCTCAAAACTACCTATATTTAGGGAAAAGTTCAAACTTCTAAAAGGCTCTATAC
AAAAGGACGGAGGGAGTAATCA
dot-bracket secondary structure
......(((((((((((((.....((((((((((((((...(((.......))).(((((...........)))))..((....................
..............................)).(((((((.((..((((.(((..........))).))))..))..))))))).)))))))))))))).
....)))))))))).)))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CGTACATACCCCTCCGTCCCTAAATATAGGGCCTTTTAACATTCAAATACAGAAATAGTCAATGTGTTAAAGACTACCATACCCTTCATTTTTACCTCAA
CCCATCACTCTACCAACCCTCCCACTTACCATAAAGTTTGTCTCATCCTCAAAACTACCTATATTTAGGGAAAAGTTCAAACTTCTAAAAGGCTCTATAC
AAAAGGACGGAGGGAGTAATCA
dot-bracket secondary structure
......(((((((((((((.....((((((((((((((...(((.......))).(((((...........)))))..((....................
..............................)).(((((((.((..((((.(((..........))).))))..))..))))))).)))))))))))))).
....)))))))))).)))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
