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ABOUT THIS RECORD

ID: MNEST000570
species: Eucalyptus globulus
miRNA family: MIRf661
source: miRNEST

Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGCCAAAGGAGAGTTGCCCT

miRNA*
GGCTTCTCTACTTTGGCAACA

mismatches: 3
bulges: 0

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pre-miRNA
ACACTGAGCAAACCAGTTTTAGGGCTTCTCTACTTTGGCAACACATGTCAATGATGACGACGACGGAGAAGTCGAACGGATGCCGTCCAGTCATCGACGA
CTTGCCAAAGGAGAGTTGCCCTTTGACTGCTTCTGCTTAAC


dot-bracket secondary structure
....((((((((.(((((..(((((..((((.(((((((((.....(((..(((((((...(((((....(((.....))).)))))..)))))))..))
)))))))))).))))..)))))..))))).)).))))))..



SIMILARITIES
miRBase vvi-MIR399b: 0.0000000001

PMRD vvi-miR399b: 0.0000000001

microPC miR399: 5e-53
UniProt no hits

RFAM mir-399: 0.000002
most similar mature miRNAs

Identical with: miR399 from microPC (MNEST046063)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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