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ABOUT THIS RECORD
ID:
MNEST000582
species:
Euonymus alatus
miRNA family:
MIR166
source:
miRNEST
Taxonomy by NCBI:
Euonymus alatus
Euonymus
Celastraceae
Celastrales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCC
miRNA*
AATGTTGTCTAGCTCGAGG
mismatches:
5
bulges:
0
View larger
pre-miRNA
GGAAGCTAATATCTTTTGAGGGG
AATGTTGTCTAGCTCGAGG
CCACTAACATTTAGATCTCTATTTCGATCAAGATCTTCTTTTACTTTTGCAGGGTTTT
AAAATAGTTTTTATTTGATAGAGAGATCAATATATTAGGGACG
TCGGACCAGGCTTCATTCC
CCCCAATTGGTGCTTCCTCA
dot-bracket secondary structure
((((((...((....(((.((((
((((..((((...((((..
((.((((.((...(((((((...((((..((((.((..(((.((((.....))))...
)))..)).))))..))))...)))))))...)).))))))...
))))...))))..))))))
)).))).))..))))))...
SIMILARITIES
miRBase
ctr-MIR166
:
0.0000000000006
PMRD
ptc-miR166c
:
0.00000000004
microPC
miR166
:
0.00000004
UniProt
no hits
RFAM
mir-166: 0.000000003
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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