ABOUT THIS RECORDspecies: Euonymus alatus
miRNA family: MIR418
source: miRNEST
Taxonomy by NCBI:
Euonymus alatus Euonymus Celastraceae Celastrales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAAGGTGATGATGAAATGAAA miRNA* TTGTTTCAGCTGTGCTTTTACTT mismatches: 4 bulges: 2 |
pre-miRNA
AATTATGGACCTAATGAAGAATATGTATGAGGAAGGTGATGATGAAATGAAAAAAACAATTGCGAAAGCCTGGACCGATGCTCGATCGGGAAAAGCTGCA
GACCCTCTAAAAGGGTATCCCTGAATCAATAGGGACGGCGACCATGTCCCAGAGTTTGGATGATTTTTGTTTCAGCTGTGCTTTTACTTTAGTCAAGTTA
CTTTGTTAATGCTGAAA
dot-bracket secondary structure
......((...(((((((((((.((..(((((((((((....(((((((((((...((...((....)).))..(((..((((....((((...((((..
.(((((.....))))).((((((......)))))))))).......)))).)))).)))....)))))))))))....))))))..)))))..)).))).
))))))))...))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AATTATGGACCTAATGAAGAATATGTATGAGGAAGGTGATGATGAAATGAAAAAAACAATTGCGAAAGCCTGGACCGATGCTCGATCGGGAAAAGCTGCA
GACCCTCTAAAAGGGTATCCCTGAATCAATAGGGACGGCGACCATGTCCCAGAGTTTGGATGATTTTTGTTTCAGCTGTGCTTTTACTTTAGTCAAGTTA
CTTTGTTAATGCTGAAA
dot-bracket secondary structure
......((...(((((((((((.((..(((((((((((....(((((((((((...((...((....)).))..(((..((((....((((...((((..
.(((((.....))))).((((((......)))))))))).......)))).)))).)))....)))))))))))....))))))..)))))..)).))).
))))))))...))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q6AYK6|CYBP_RAT: 0.0003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
