miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000584
species: Euonymus alatus
miRNA family: MIRf606
source: miRNEST

Taxonomy by NCBI:
Euonymus alatus Euonymus Celastraceae Celastrales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGGTTTGGAATGCAGACAGAG

miRNA*
TGTTTTCATTTATCATATCCAG

mismatches: 3
bulges: 2

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pre-miRNA
CTTGATGGCAAAGCAAGATATGGCAGAACTTGGGTTTGGAATGCAGACAGAGATGGAATCCTCTGGAGAGAAGAATAATGGGAGGATTGATACCTGAAGT
TGATCAACACTAAGTTGTGCCATCATTGTTAATTATTCCCCTTCTTTCAATTTATATAGATAATAAATTCTCTATATGTTAATCCTGTTTTCATTTATCA
TATCCAG
ATCGGTTCACCATATTGTTGCAAGCTAT


dot-bracket secondary structure
....(((((...(((((((((((..((((((((((.(((((((.((((((.((((((....))).((((((((......((((.((((((((..(((.((
....((((.....)))).))..))).))))))))..))))))))))))....((((((((.((....)).))))))))...))))))))).))))..)))
.))))).
...))))).))))))).))))..)))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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