ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIR166
source: miRNEST
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCC miRNA* AATGTTGTCTGGCTCGAGG mismatches: 3 bulges: 0 |
pre-miRNA
CTATCTCTTTCAGGGAGCTTCTTTTTTGAGGGGAATGTTGTCTGGCTCGAGGACTCTACGCCGTTAGATCTGTGTATATATTGAATCTAATCTACCATCG
TTAGGGTCGTCGGACCAGGCTTCATTCCCCCCAATTAATGCTTCCGTTTCTGCTCTAT
dot-bracket secondary structure
............((((((...((..(((.((((((((..((((((.((((.(((((((((..((((((((.(((....))).).))))))).......))
.))))))).)))).))))))..)))))))).)))..)).)))))).............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CTATCTCTTTCAGGGAGCTTCTTTTTTGAGGGGAATGTTGTCTGGCTCGAGGACTCTACGCCGTTAGATCTGTGTATATATTGAATCTAATCTACCATCG
TTAGGGTCGTCGGACCAGGCTTCATTCCCCCCAATTAATGCTTCCGTTTCTGCTCTAT
dot-bracket secondary structure
............((((((...((..(((.((((((((..((((((.((((.(((((((((..((((((((.(((....))).).))))))).......))
.))))))).)))).))))))..)))))))).)))..)).)))))).............
SIMILARITIES| miRBase ptc-MIR166c: 0.000000000000009 PMRD ptc-miR166c: 0.000000000000009 microPC miR166: 3e-51 | UniProt no hits RFAM mir-166: 0.000000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
