ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIRf772
source: miRNEST
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGCTCTCTATGCTTCTGTCA miRNA* ACAGAAGATAGAGAGCACAG mismatches: 0 bulges: 1 |
pre-miRNA
ATTATAAAAAATAGGGAGAGAAGAGGAACAGAGTGGGTGAGTGTTGTTGACAGAAGATAGAGAGCACAGATGATGATTTTGGAGTTGAAATTAATCAAAT
TCACTCCTTTGTGCTCTCTATGCTTCTGTCATTAACTCTTCTTTTGCCTCTTTTCTTCTTTATTTTCATATATTATA
dot-bracket secondary structure
..(((.((((..((((((((((((((..(((((.(((.....((((.(((((((((((((((((((((((.(((((.(((((............))))).
))).)).)))))))))))))).))))))))).)))).))).)))))))))))))))))))..)))).))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTATAAAAAATAGGGAGAGAAGAGGAACAGAGTGGGTGAGTGTTGTTGACAGAAGATAGAGAGCACAGATGATGATTTTGGAGTTGAAATTAATCAAAT
TCACTCCTTTGTGCTCTCTATGCTTCTGTCATTAACTCTTCTTTTGCCTCTTTTCTTCTTTATTTTCATATATTATA
dot-bracket secondary structure
..(((.((((..((((((((((((((..(((((.(((.....((((.(((((((((((((((((((((((.(((((.(((((............))))).
))).)).)))))))))))))).))))))))).)))).))).)))))))))))))))))))..)))).))).......
SIMILARITIES| miRBase vvi-MIR156g: 0.0000000000002 PMRD vvi-miR156g: 0.0000000000002 microPC miR157: 9e-43 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR157 from microPC (MNEST046718) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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