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ABOUT THIS RECORD
ID:
MNEST000626
species:
Fagus sylvatica
miRNA family:
MIR2606
source:
miRNEST
Taxonomy by NCBI:
Fagus sylvatica
Fagus
Fagaceae
Fagales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GACAATTCCTTAGGTGCTATA
miRNA*
TAACACCTAAGATATTGTACCT
mismatches:
3
bulges:
1
View larger
pre-miRNA
TAAAACTTATG
GACAATTCCTTAGGTGCTATA
TCTTAGATTCTCCAATTTAATTGAACCATGTGACTGTATTAATCAATCCATTTTAGTTAATATAATCA
CATTGTTGAATTTAATTGAAGAATATAAGATA
TAACACCTAAGATATTGTACCT
AAATTTTA
dot-bracket secondary structure
(((((.(((.(
((((((..((((((((.((((
(((((.(((((.(((((.((((.(((.((((((.(((((((((.((......)).))))))))).)))
))).))).)))).))))).))))).)))))))
)).))))))))..))))).)))
)).)))))
SIMILARITIES
miRBase
mtr-MIR2606c
:
0.0005
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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