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ABOUT THIS RECORD
ID:
MNEST000628
species:
Fagus sylvatica
miRNA family:
MIRf427
source:
miRNEST
Taxonomy by NCBI:
Fagus sylvatica
Fagus
Fagaceae
Fagales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAGAGCAAGAGCAGCAGATAA
miRNA*
GTTTGTAGCTACTTGCTCACCC
mismatches:
3
bulges:
1
View larger
pre-miRNA
GAAGTGATGCA
GAGAGCAAGAGCAGCAGATAA
CCAGTT
GTTTGTAGCTACTTGCTCACCC
TCTCGAGA
dot-bracket secondary structure
...........
..((((((((((.((((((((
....))
)))))).))).)))))))....
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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