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ABOUT THIS RECORD

ID: MNEST000631
species: Fagus sylvatica
miRNA family: miR162
source: miRNEST

Taxonomy by NCBI:
Fagus sylvatica Fagus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGGCAGCGGTTCATCGAT

miRNA*
CGATAAACCTCTGCATCCAGC

mismatches: 3
bulges: 0

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pre-miRNA
TTGGTTGGTGGGTATGATAGGGTGAAGTCACTGGAGGCAGCGGTTCATCGATCTCTTCCTGGGAAATTTGTTGTGACACTAACACAAACATGAATCGGTC
GATAAACCTCTGCATCCAGC
GCTCACTTCTCTCTCTCTCTCTCTCTCT


dot-bracket secondary structure
......((.(((...((.((((.(((((..(((((.((((.((((.(((((((..(((.((.........(((((.......))))).)).)))..))))
))).)))).)))).))))).
....)))))...)))).)).))).))..



SIMILARITIES
miRBase ghr-MIR162a: 2e-31

PMRD ghr-miR162a: 2e-31

microPC miR162: 6e-28
UniProt no hits

RFAM MIR162_2: 4e-20
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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