miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000680
species: Festuca pratensis
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA

miRNA*
GCGTGCGAGGAGCCAAGCATG

mismatches: 2
bulges: 0

View larger
pre-miRNA
AACTTGGGATATGCCTGGCTCCCTGTATGCCACTCGCGTAGCTGCCAACTCGGTTCACCTCCCACCACCGTAGCGTTGGCTCTACCGCGGATGGCGTGCG
AGGAGCCAAGCATG
ACCATCTC


dot-bracket secondary structure
....(((..(((((.(((((((.(((((((((.((((((((..((((((.((((............))))....)))))).))).))))).)))))))))
.))))))).)))))
.)))....



SIMILARITIES
miRBase tae-MIR160: 2e-27

PMRD tae-miR160: 2e-27

microPC miR160: 1e-19
UniProt no hits

RFAM mir-160: 0.000000000000008
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;