ABOUT THIS RECORDspecies: Festuca pratensis
miRNA family: MIR1122
source: miRNEST
Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTCCCTCCGTTCCAAAATG miRNA* TTAAGGAGCTGAGGTAGTAGT mismatches: 4 bulges: 0 |
pre-miRNA
TTAGAAAATAGGCTCTTTTTACTACTCCCTCCGTTCCAAAATGCAAGACGTTGTGGGCAGTTCAATCTGAACTGCCAAAACTTCTTATATTAAGGAGCTG
AGGTAGTAGTAGTATAGCAGTTTATTGGA
dot-bracket secondary structure
......((((((((((..((((((((.((((.(((((..((((.((((.(((...(((((((((...)))))))))..))).)))).))))..))))).)
))).))))))))...)).))))))))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTAGAAAATAGGCTCTTTTTACTACTCCCTCCGTTCCAAAATGCAAGACGTTGTGGGCAGTTCAATCTGAACTGCCAAAACTTCTTATATTAAGGAGCTG
AGGTAGTAGTAGTATAGCAGTTTATTGGA
dot-bracket secondary structure
......((((((((((..((((((((.((((.(((((..((((.((((.(((...(((((((((...)))))))))..))).)))).))))..))))).)
))).))))))))...)).))))))))...
SIMILARITIES| miRBase tae-MIR1137: 0.0001 PMRD tae-miR1137: 0.0001 microPC miR1439: 0.00002 | UniProt no hits RFAM MIR1122: 0.0001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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