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ABOUT THIS RECORD
ID:
MNEST000746
species:
Gossypium hirsutum
miRNA family:
MIRf1215
source:
miRNEST
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTGGTCATTTTGTTTACAGG
miRNA*
TGTGAACATCTGGACCANGGGG
mismatches:
5
bulges:
1
View larger
pre-miRNA
GTGTTCAGATC
CCTGGTCATTTTGTTTACAGG
ACCAGGTTCTCTAGGACCTCAGGAAAGAGCTTCCTTTTACCACAATGCCGGACTGATATTTTATATGT
GTCTGACCCT
TGTGAACATCTGGACCANGGGG
ACGAGGGT
dot-bracket secondary structure
...(((...((
((.((((....((((((((((
...((((((....)))))).(((((.....))))).((.....))...(((((..((((...))))..
)))))...))
))))))))....))))..))))
..)))...
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11908-akr
:
9e-27
microPC
no hits
UniProt
sp|Q9LF38|EDL1_ARATH: 3e-17
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record