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ABOUT THIS RECORD
ID:
MNEST000755
species:
Gossypium hirsutum
miRNA family:
MIRf94
source:
miRNEST
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGACCCAAAATCCTTGGTTCA
miRNA*
GATCAAGGATCAGGGCTCG
mismatches:
3
bulges:
2
View larger
pre-miRNA
TAGGTCTGACCGG
GATCAAGGATCAGGGCTCG
TGGCAATGCTCGGTGGATATGCACTTGCATATTTCATAGTGCTTTGTGGTGCTTTTGCTTGGGGAGTT
GATTCTTCTTCATCAGCATCAAAGCGG
AGACCCAAAATCCTTGGTTCA
CACATGGAGT
dot-bracket secondary structure
..(((...))).(
((((((((((..((((((.
..((((.((...((((((((((....))))).)))))...)).))))..(((((((((((((((((..
.....)))))))..))))..)))))))
)).)))...))))))))))).
..........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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