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ABOUT THIS RECORD
ID:
MNEST000757
species:
Gossypium hirsutum
miRNA family:
MIR413
source:
miRNEST
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGTTTCTCTAGTTCTGCAC
miRNA*
TTAGGACTAGGAAACAGAAA
mismatches:
2
bulges:
1
View larger
pre-miRNA
CTACAGTTTAATGGCATTTAGACATCTGATG
TTGGTTTCTCTAGTTCTGCAC
TTATTCATTTATAGATTGGAAATTTGTATCTTTGTGT
TTAGGACTAGG
AAACAGAAA
GGTGTTCAAAAGTTCCATTTGGCCTTGG
dot-bracket secondary structure
.....(((.(((((.((((.(((((((....
((.(((((.(((((((((.((
.....((..((((((((...))))))))....)).))
.))))))))))
)))).)).)
))))))...)))).))))).))).....
SIMILARITIES
miRBase
no hits
PMRD
ghr-miR413
:
2e-37
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
Identical with:
ghr-miR413
from PMRD (
MNEST048516
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record