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ABOUT THIS RECORD

ID: MNEST000786
species: Oryza sativa
miRNA family: MIRf75
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCGAGACGAATCTTTTAAGG

miRNA*
TTAATAAATTTGTCTCGCAGT

mismatches: 4
bulges: 0

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pre-miRNA
TGAAAAAAAAACCAATTACACTTGTTGTGTGTAAATTGCGAGACGAATCTTTTAAGGCTAATTGCGCCATGATTTGACAATGTGTTGCTACAGTAAACAT
TTGCTAATGACGGATTAATTAAGCTTAATAAATTTGTCTCGCAGTTTACAGGCGGATTATGTAATTTGTTTTGTTATT


dot-bracket secondary structure
....((.(((((.(((((((....((((.(((((((((((((((((((...(((((..((((((..((.....(((.(((.(((((.........)))))
))).)))....))..))))))..)))))...))))))))))))))))))).))))....))))))).))))).))...



SIMILARITIES
miRBase osa-MIR442: 2e-62

PMRD osa-miR442: 2e-62

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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