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ABOUT THIS RECORD

ID: MNEST000796
species: Gossypium hirsutum
miRNA family: MIRf1372
source: miRNEST

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCGAGTTTCTCGAAGATGTCA

miRNA*
ATATCTGGATGGACTTGCTT

mismatches: 3
bulges: 1

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pre-miRNA
AAGACTCTTGGGCGAGTTTCTCGAAGATGTCATTGATGAAACTGTTCATGATTCCCATAGCTTTGCTTGAGATACCGATATCTGGATGGACTTGCTTCAG
GACCT


dot-bracket secondary structure
.....((((((((((((((.((..(((((((....(((((....)))))(.(((....(((...))).))).)...))))))).)).)))))))).))))
))...



SIMILARITIES
miRBase no hits

PMRD osa-miRf10144-akr: 0.00002

microPC no hits
UniProt sp|Q1S9I9|H2B1_MEDTR: 0.000000000007

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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