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ABOUT THIS RECORD
ID:
MNEST000812
species:
Gossypium raimondii
miRNA family:
MIR398
source:
miRNEST
Taxonomy by NCBI:
Gossypium raimondii
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTGTTCTCAGGTCACCCCT
miRNA*
GGGTGCCACCTAAGAACACAGG
mismatches:
1
bulges:
2
View larger
pre-miRNA
TCACCCACTTAGCCAAGATGGTTTACCCCAGAG
GGGTGCCACCTAAGAACACAGG
TCATCCCTTAACCAAATAGCT
TGTGTTCTCAGGTCACCCCT
TTGG
GGTACATATATCTTCGCCTATTTTCT
dot-bracket secondary structure
...........((.((((((...((((((((((
(((((..((((.((((((((((
(.((...........)).)))
)))))))).)))))))))))
))))
))))....)))))).)).........
SIMILARITIES
miRBase
gra-MIR398
:
5e-56
PMRD
ghr-miR398
:
3e-32
microPC
miR398
:
3e-32
UniProt
no hits
RFAM
MIR398: 0.0000005
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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