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ABOUT THIS RECORD

ID: MNEST000822
species: Guizotia abyssinica
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Guizotia abyssinica Guizotia Millerieae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCTACCATTGCCTACATTAT

miRNA*
AATGGGTGGAGGTCGAGCC

mismatches: 4
bulges: 2

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pre-miRNA
GTCTCACTCTTCTGAATCCGGAAATGGGTGGAGGTCGAGCCCCGTTAAATCGAGGTTACAGTTTGCAGAAAATTCTTCCTGACTCTATAACCAAAGTGTA
CAAAGTAACAGATTTTTGGCGCGTGAATTTTAGACTTGCAGCACTGTTCATTACGGACCTGTTATCTGCATATGCAATATATGTGATGATGAACTATTTA
ACAAATGTCTGGAATTTAAGCATTACACGGGGTGCTGCTATCATAAACATTTGGGATGGAATCACATCGGCTTTGGTCATTGTGCTTGCCTTTTTTGTTG
ATGCCTTCTTGGATGCCTTCTATATGGTTGTACTCTCTACCATTGCCTACATTATCGGATTTGGATTATTGTCC


dot-bracket secondary structure
..........(((((((((((.(((((((((.(((.(((((((((.(((((..(((((.((....(((.((....)).)))...)).)))))...((...
.......)).))))).(((.((.((((((((((((..........((((((((.(((.......)))(((((((...)))))))..))))))))......
......)))))))))))).)).))).)))))))..(((.((((((..(((((((((.((.((((((..(((...(((......))).))).....)).))
)).)).))))))))).......)))))).)))...)).))).))))))..))).))))))))))).........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|O80436|PTR29_ARATH: 0.0002

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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