miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000823
species: Guizotia abyssinica
miRNA family: MIRf315
source: miRNEST

Taxonomy by NCBI:
Guizotia abyssinica Guizotia Millerieae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGGTCCCTCATGTTGTCAGG

miRNA*
TGAGCACAAGAGGGGCCTTTA

mismatches: 3
bulges: 0

View larger
pre-miRNA
GCTTCTCGATGACGCAGACGGCCCCGAGAATGCTGTGAAGAGAATGAAGCACTGAATAATGCAGCTCCGAACTGGCCACAGATGCTGATTAAAGGTCCCT
CATGTTGTCAGG
ACCTAAAAGAATATCCAGCTATATTTCATCCTCCCTAGGAAGGTTGAATATTAGCTCGATTTTCGTTTATGTTCTGAGCACAAGAGGG
GCCTTTA
ATCAGGATCTGTGGCCATGTTGGAGCGGGCAATTTTGGAGCTTCATTCTCTTCACATCAATCTCGGGGACGTTAGCGTCCTTTCCATT


dot-bracket secondary structure
.......((.(((((.((((.((((((((.((.(((((((((((((((((.(((((...(((.(((((((..(((((((((((.((((((((((((((((
(.(((..(((((
((.((((.(((.(((.(((((...((((.(((((...)).))).))))...))))).))).))).)))).)))))))..))).)))))
)))))))
))))).)))))))))))..)))))))..)))..))))).))))))))))))))))).)).)))))))).)))).)))))...))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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