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ABOUT THIS RECORD

ID: MNEST000828
species: Guizotia abyssinica
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Guizotia abyssinica Guizotia Millerieae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACGGCTTTCTTGAACTG

miRNA*
 GTTCAATAAAGCTGTGGGAAG

mismatches: 1
bulges: 0
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pre-miRNA
 AACTGCCATAAAAATGGTTCTCTTTCTATTCTTCCACGGCTTTCTTGAACTGCATGGGGTTTGATCTACCAGATCTGCGTTTTTATATGCAATCTTTGCG
GTTCAATAAAGCTGTGGGAAGATAGAGACAGAATCAAAACCAGAAGAAT

dot-bracket secondary structure
..............(((((((.((((((((.((((((((((((.((((((((((.(((....(((((...)))))(((((......))))).))).))))
)))))).)))))))))))).)))))))).))))))).............


SIMILARITIES
miRBase aly-MIR396a: 0.00000000003

PMRD ath-miRf11010-akr: 0.000000000002

microPC miR396: 3e-30		UniProt no hits

RFAM MIR396: 0.0000000006		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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