ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCTGTAAACTAATATAAAAG miRNA* TTTATATTAGTTTACGGAGAG mismatches: 0 bulges: 0 |
pre-miRNA
TTTTATGCTAGCTACTACTCCCTCTGTAAACTAATATAAAAGTGTTTAGATAACTAAAAGTGCTTTAAATGCTTTTATATTAGTTTACGGAGAGAGTATA
AATGTCGGTCTA
dot-bracket secondary structure
......(((.((...(((((.(((((((((((((((((((((((((((((..(((...)))..))))))))))))))))))))))))))))).)))))..
...)).)))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTTATGCTAGCTACTACTCCCTCTGTAAACTAATATAAAAGTGTTTAGATAACTAAAAGTGCTTTAAATGCTTTTATATTAGTTTACGGAGAGAGTATA
AATGTCGGTCTA
dot-bracket secondary structure
......(((.((...(((((.(((((((((((((((((((((((((((((..(((...)))..))))))))))))))))))))))))))))).)))))..
...)).)))...
SIMILARITIES| miRBase tae-MIR1121: 0.00002 PMRD tur-miR1120: 0.000001 microPC no hits | UniProt no hits RFAM MIR1122: 8e-24 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
