miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST001023
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATACTTCCTCCGTCCCAAAA

miRNA*
TTGGAACAGAGGGAATATATG

mismatches: 4
bulges: 0

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pre-miRNA
TGAGCTTTATCTAATGATATTTAATACTTCCTCCGTCCCAAAATAAGTGATTTAAAAATGACTCAGTTTTGTACTAACTTTAGTACAAAATTGAGTCACT
TATTTTGGAACAGAGGGAATATATGTTTAGATATAGTAGTCCCA


dot-bracket secondary structure
...(((.((((((..(((((...(((.((((((.((.(((((((((((...........(((((((((((((((((....))))))))))))))))))))
)))))))).)).)))))).)))))))))))))).))).......



SIMILARITIES
miRBase tae-MIR1137: 0.000000002

PMRD tae-miR1137: 0.000000002

microPC miR1439: 0.000000002
UniProt no hits

RFAM MIR1122: 1e-20
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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