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ABOUT THIS RECORD

ID: MNEST001071
species: Hordeum vulgare
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTGGGACAGAGGGAGTACT

miRNA*
TACTCCCTCCGTCCCAAAATA

mismatches: 2
bulges: 0

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pre-miRNA
TGCACTCTTGTACTCCCTCCGTCCCAAAATAAGTGACGCAGATTTAGTACTAAATTAGTATAAATTTTGTACTAGATCAACGACACTTATTTTGGGACAG
AGGGAGTACT
ATATTTC


dot-bracket secondary structure
.........((((((((((.(((((((((((((((.((..((((((((((.(((((......))))).))))))))))..)).))))))))))))))).)
))))))))).
.......



SIMILARITIES
miRBase osa-MIR1862d: 0.000006

PMRD hpr-miR1120: 0.00000002

microPC miR1439: 0.00000002
UniProt no hits

RFAM MIR1122: 5e-28
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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