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ABOUT THIS RECORD

ID: MNEST001078
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCTGTCCCAAAATAAGTGT

miRNA*
AGTTATTTTGGGACAGAGGAA

mismatches: 1
bulges: 0

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pre-miRNA
AGAATATACTCTTAGATACTCCCTCTGTCCCAAAATAAGTGTCTCAACTTTATACTAGCTTTAGTACAAATTTGTACTAAGCTTGAGACAGTTATTTTGG
GACAGAGGAA
GTACTAAATTACACTACA


dot-bracket secondary structure
...........((((.((((.(((((((((((((((((.(((((((..........(((((.((((((....)))))))))))))))))).)))))))))
)))))))).)
)))))))...........



SIMILARITIES
miRBase far-MIR1122: 0.000006

PMRD hpr-miR1120: 0.000000000002

microPC miR1439: 8e-24
UniProt no hits

RFAM MIR1122: 2e-31
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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