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ABOUT THIS RECORD

ID: MNEST001089
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTTCCTAAATA

miRNA*
TTTAAGAACACGGAGGGAGTACA

mismatches: 1
bulges: 2

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pre-miRNA
TTTACTCTATGATTGAAAATTATTCATATAAAATACTCCCTCCGTTCCTAAATATAAGTCTTTTAAAGCGATTTCACTAAGGGTCTACATGCGGAGCAAA
ATGATTGAATCTATACTTTAAAATATGTCTATATACATCCGTATCTAGTCCACTAGTGAAAGAACACTTATATTTAAGAACACGGAGGGAGTACATTATA
CATGCTCATCTATTAAGTGAAGCGG


dot-bracket secondary structure
.......(((((.(((...))).))))).....((((((((((((((.(((((((((((.(((........((((((((..((.(((.(((((((.....
..(((.....................)))........))))))).))).))..))))))))))).))))))))))).))..)))))))))))).......
..(((((((.......))).)))).



SIMILARITIES
miRBase tae-MIR1122: 0.00000000000005

PMRD tae-miR1122: 0.00000000000005

microPC miR1436: 1e-27
UniProt no hits

RFAM MIR1122: 2e-38
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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