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ABOUT THIS RECORD

ID: MNEST001099
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTTCCTAAATA

miRNA*
TTTAGGAACGGAGGAAGTATT

mismatches: 1
bulges: 0

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pre-miRNA
CAGTTATGATCTACTCCCTCCGTTCCTAAATATAAGTCTTTGTAGAGATTTCACTAGTGGGCTACATACGGATGTATATAGACATACTTTAGAGTGTACA
TTCAATCATTTTGCTCCGTATGTAGACATATAGTGAAATCGCTTAAAAGACTTATATTTAGGAACGGAGGAAGTATTATGCTAAC


dot-bracket secondary structure
.(((.((((..((((.(((((((((((((((((((((((((..((.(((((((((((((..((((((((((((((((((..............)))))))
..............))))))))))).))).)))))))))).))..))))))))))))))))))))))))).)))))))))))...



SIMILARITIES
miRBase tae-MIR1126: 1e-26

PMRD tae-miR1126: 1e-26

microPC miR1436: 7e-53
UniProt no hits

RFAM MIR1122: 1e-79
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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