miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST001101
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTTCCTAAATA
miRNA*
TTTAGGAACGGAGGGAGTATA
mismatches:
0
bulges:
0
View larger
pre-miRNA
AGCATATCATC
TACTCCCTCCGTTCCTAAATA
TAAGTATTTTAAGATATTTCATTAGGAATCTACATACAGAGCAAAATAAGTGAATCTACACTCTAAAA
TATGTCTATATACATCCGTATGTAGTTCATCATGAAACCTCTTTAAAGACTTATA
TTTAGGAACGGAGGGAGTATA
AGGTACGG
dot-bracket secondary structure
....((((...
(((((((((((((((((((((
(((((.(((.((((..((((((...(((.((((((((.((.....(((((((......))))......
......))).....)).)))))))))))...))))))..)))).))).)))))))
)))))))))))))))))))..
.))))...
SIMILARITIES
miRBase
tae-MIR1126
:
8e-28
PMRD
tae-miR1126
:
8e-28
microPC
miR1436
:
3e-24
UniProt
no hits
RFAM
MIR1122: 3e-43
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record