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ABOUT THIS RECORD

ID: MNEST001113
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCCGTTCCTAAATATAAGAC

miRNA*
 ATTATATTTAGGAATCGGAGGG

mismatches: 1
bulges: 1
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pre-miRNA
 AATTATACTCCCTCCGTTCCTAAATATAAGACTTTTTAAAGATTACACTATGGATTAGATACGGAGCAAAATAAGTGAATCTACATCCTAAAATATGAAT
ACATACATCTGTATGTAGTTTATAATGGAATTTTTAAAAGGTATTATATTTAGGAATCGGAGGGAGTAGTAA

dot-bracket secondary structure
.....((((((((((((((((((((((((.((((((((((((((.((.(((((((((.(((((((...................................
.......))))))).))))))))).)).)))))))))))))).))))))))))))).)))))))))))....


SIMILARITIES
miRBase tae-MIR1122: 2e-19

PMRD tae-miR1122: 2e-19

microPC miR1126: 0.0000006		UniProt no hits

RFAM MIR1122: 6e-41		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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