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ABOUT THIS RECORD

ID: MNEST001114
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCCGTTCCTAAATATAAGTT

miRNA*
 CTTATATTTAGGAACGTACAT

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AGAGATTTTGAAACGGATGGAGTAATAAGCAGTCAACTTTTACTCTACTCCCTCCGTTCCTAAATATAAGTTTTTGTAGAGATTTCACTAGTGGGCTACA
TACGGATGTATATAGACATACTTTAGAGTATATATTCAATCATTTTGCTCCGTATGTAGACCCTTAGTGAAATCGCTTAAAAGACTTATATTTAGGAACG
TACATGTTATTCTGACCAAGAGAAAACAAAGGTCACTGATCACAATTCACCAC

dot-bracket secondary structure
..............(((((((((((.(((.......))))))))))).)))...(((((((((((((((((((((..((.(((((((((((.((((((((
((((((((.(((((.((..........)).))))).))..........))))))))))).)))))))))))))).))..)))))))))))))))))))))
....(((.(((.(((((.............)))))..))).))).........


SIMILARITIES
miRBase tae-MIR1126: 6e-20

PMRD tae-miR1126: 6e-20

microPC miR1436: 1e-45		UniProt no hits

RFAM MIR1122: 1e-64		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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