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ABOUT THIS RECORD

ID: MNEST001116
species: Hordeum vulgare
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACTACTCCCTCCGTTCCTAAA

miRNA*
TTGGAAGGGAGGGAGTATGTA

mismatches: 4
bulges: 0

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pre-miRNA
CCGCATGGCATGCAAGAGAGCTTGCTGTCTAACTACTCCCTCCGTTCCTAAATATAAGACTTTTTAAGATTTTATTTCAAACTACGTATGGATGTATATA
TACATATTTTAGATTGGATTCATTCATTTTGCTCTGTATGTAGTCCGTAGTAGAATCTCTAGAAAGACTTGTACTCCTCCGTCCCAAAATAAGTGAGCTA
GTACAAAGTTGTACTTAGCTCGAGACATTTATTTTGGAAGGGAGGGAGTATGTAATATGGCTGCTGTTGCTTGTAATACTAC


dot-bracket secondary structure
......((((.(((((....)))))))))....((((((((((.((((.(((((((((.(((((((((((((((((....((((((((((((((((....
)))).....((((.((((....)))).)))).))))))))))))....)))))))))).))))))).)))))((......))....((((...(((((((
(((((....))))).)))))))....)))))))).)))).)))))))))).(((.(((.((.((....))..)).))).)))



SIMILARITIES
miRBase tae-MIR1122: 0.000000000001

PMRD tae-miR1122: 0.000000000001

microPC miR1439: 0.000000004
UniProt no hits

RFAM MIR1122: 8e-20
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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