miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST001127
species: Hordeum vulgare
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATTTTGGGACGGAGGGAAT

miRNA*
TCCCTCCGTCCCAAAATAAGT

mismatches: 1
bulges: 0

View larger
pre-miRNA
AAATATACTCCCTCCGTCCCAAAATAAGTGTCTTGAGCTTAGTACAACTTTGTACTAGAGCTAGTATAAAGTTGAGACATTTATTTTGGGACGGAGGGAA
T
ACTAC


dot-bracket secondary structure
.....((.(((((((((((((((((((((((((...........(((((((((((((....)))))))))))))))))))))))))))))))))))))).
)
)....



SIMILARITIES
miRBase osa-MIR1862e: 0.000005

PMRD hpr-miR1120: 0.0000000003

microPC miR1439: 3e-29
UniProt no hits

RFAM MIR1122: 2e-36
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;