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ABOUT THIS RECORD
ID:
MNEST001127
species:
Hordeum vulgare
miRNA family:
MIR1436
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTATTTTGGGACGGAGGGAAT
miRNA*
TCCCTCCGTCCCAAAATAAGT
mismatches:
1
bulges:
0
View larger
pre-miRNA
AAATATAC
TCCCTCCGTCCCAAAATAAGT
GTCTTGAGCTTAGTACAACTTTGTACTAGAGCTAGTATAAAGTTGAGACAT
TTATTTTGGGACGGAGGGAA
T
ACTAC
dot-bracket secondary structure
.....((.
(((((((((((((((((((((
((((...........(((((((((((((....)))))))))))))))))))
))))))))))))))))))).
)
)....
SIMILARITIES
miRBase
osa-MIR1862e
:
0.000005
PMRD
hpr-miR1120
:
0.0000000003
microPC
miR1439
:
3e-29
UniProt
no hits
RFAM
MIR1122: 2e-36
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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