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ABOUT THIS RECORD
ID:
MNEST001135
species:
Hordeum vulgare
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACTCCCTCCGTCCTAAAATAA
miRNA*
ATTTTGGGAGGGAGGGAGTAC
mismatches:
1
bulges:
0
View larger
pre-miRNA
GGTTGGT
ACTCCCTCCGTCCTAAAATAA
GTGTCTTACGGTTAGTACAATTNTATACTAGAGCTAGTATAAAGTTGAGACAGTT
ATTTTGGGAGGGAGGGA
GTAC
TTTG
dot-bracket secondary structure
....(((
(((((((((.(((((((((((
.((((((((.....)))(((((.(((((((....))))))).)))))))))).))
))))))))).)))))))
))))
)...
SIMILARITIES
miRBase
far-MIR1122
:
0.0003
PMRD
hpr-miR1120
:
0.000000001
microPC
miR1439
:
3e-29
UniProt
no hits
RFAM
MIR1122: 5e-28
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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