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ABOUT THIS RECORD
ID:
MNEST001139
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATAATCCCTCAGTCCCAAAAT
miRNA*
TTTGGGACAGAGGGAGTATGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AATTTTGTTTC
ATAATCCCTCAGTCCCAAAAT
AAGTGTCTTAACTCTAGTACAATTTTGTACTAAAGTTAGTACAAACTTGAGACACTTAT
TTTGGGACA
GAGGGAGTATGA
AGTACTCT
dot-bracket secondary structure
.......((((
(((.((((((.((((((((((
(((((((((((((.(((((((....))))))).))))(((....))).)))))))))))
)))))))).
)))))).)))))
))......
SIMILARITIES
miRBase
tae-MIR1137
:
0.0000001
PMRD
hpr-miR1120
:
0.000000002
microPC
miR1439
:
3e-17
UniProt
no hits
RFAM
MIR1122: 1e-25
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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