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ABOUT THIS RECORD
ID:
MNEST001143
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTCCGTCCTAAAATAAGTGT
miRNA*
ACTTATTTTAACACGGAAGGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
ACTACACACTAACTATTACTC
CCTCCGTCCTAAAATAAGTGT
CTAAAGCTTAATATAACTTTATACTAAAACTAGTATAACGTTGAGAC
ACTTATTTTAA
CACGGAAGGA
GTATAATCCTCATTGGTT
dot-bracket secondary structure
................(((((
(.(((((..((((((((((((
((...........((((.((((((((....)))))))).))))))))
)))))))))).
.))))).)))
)))....((.....))..
SIMILARITIES
miRBase
far-MIR1122
:
0.0004
PMRD
osa-miRf10381-akr
:
0.0001
microPC
miR1439
:
1e-16
UniProt
no hits
RFAM
MIR1122: 3e-20
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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