ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTCCCTCCGTCCCATAATA miRNA* TTTTGAGATGGAGGGGGTATA mismatches: 2 bulges: 0 |
pre-miRNA
CAGTCAGCATGGTATGTACTCCCTCCGTCCCATAATATAAGAGCGTTTTTGACACTACACTAGTGTTAAAAAACACTTATATTTTGAGATGGAGGGGGTA
TATTATAGTAACAAA
dot-bracket secondary structure
......((.((..((((((((((((((((.((.((((((((....((((((((((((...))))))))))))...)))))))).)).)))))))))))))
)))..))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAGTCAGCATGGTATGTACTCCCTCCGTCCCATAATATAAGAGCGTTTTTGACACTACACTAGTGTTAAAAAACACTTATATTTTGAGATGGAGGGGGTA
TATTATAGTAACAAA
dot-bracket secondary structure
......((.((..((((((((((((((((.((.((((((((....((((((((((((...))))))))))))...)))))))).)).)))))))))))))
)))..))))......
SIMILARITIES| miRBase tae-MIR1120: 0.000000000006 PMRD tae-miR1120: 0.000000000006 microPC miR1439: 3e-17 | UniProt no hits RFAM MIR1122: 8e-21 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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