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ABOUT THIS RECORD
ID:
MNEST001153
species:
Hordeum vulgare
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCTGTAAACTAATATAAGAT
miRNA*
CGTGTATTAGTTTGCAGAGGG
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTAGTACTCC
CTCTGTAAACTAATATAAGAT
CTTGTAGATCACTATTTTAGTTATCTAAAAGCT
CGTGTATTAGTTTGCAGAGGG
AGTACAT
dot-bracket secondary structure
...(((((((
(((((((((((((((((.((.
(((.(((((.((((...)))).))))).))).)
).)))))))))))))))))))
)))))..
SIMILARITIES
miRBase
tae-MIR1121
:
0.00002
PMRD
tmo-miR1120
:
3e-22
microPC
miR1121
:
0.00002
UniProt
no hits
RFAM
MIR1122: 2e-21
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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