ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIRf34
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATGGGACAGAGGGAGTAAT miRNA* TGCTCCCTCCATCCAATGACA mismatches: 5 bulges: 0 |
pre-miRNA
AGCTAAACTAATGCTCCCTCCATCCAATGACATAAGAATGTTTTTAAAGCTATCATAATATAAGCAAAACATTCTTATATTACGATAGCTTGCAAAACAT
TCTTATATTATGGGACAGAGGGAGTAATATAGAAAC
dot-bracket secondary structure
...........(((((((((..(((.((((.(((((((((((((..((((((((.(((((((((.........))))))))).))))))))..)))))))
)))))).)))).)))..)))))))))..........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
AGCTAAACTAATGCTCCCTCCATCCAATGACATAAGAATGTTTTTAAAGCTATCATAATATAAGCAAAACATTCTTATATTACGATAGCTTGCAAAACAT
TCTTATATTATGGGACAGAGGGAGTAATATAGAAAC
dot-bracket secondary structure
...........(((((((((..(((.((((.(((((((((((((..((((((((.(((((((((.........))))))))).))))))))..)))))))
)))))).)))).)))..)))))))))..........
SIMILARITIES| miRBase tae-MIR1120: 0.0000004 PMRD tae-miR1120: 0.0000004 microPC miR1436: 0.000002 | UniProt no hits RFAM MIR1122: 0.000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
