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ABOUT THIS RECORD
ID:
MNEST001200
species:
Hordeum vulgare
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGAACGGAGGGAGTAGA
miRNA*
TACTACTCTGCCCTAAAATA
mismatches:
4
bulges:
1
View larger
pre-miRNA
CCATGGACAAAC
TACTACTCTGCCCTAAAATA
AGTGTAGCAAATTTAGTATTAAGTTAGTATAAATTTTATATTAAAACATCAACACTTA
TTTTGGAACG
GAGGGAGTAGA
TTAGAACTC
dot-bracket secondary structure
...........(
((((.(((((..((((((((
(((((......((((((((.(((((......))))).))))))))......)))))))
))))))..))
)))..))))).
.........
SIMILARITIES
miRBase
tae-MIR1137
:
0.0004
PMRD
osa-miRf11605-akr
:
0.000006
microPC
miR1439
:
0.0000001
UniProt
no hits
RFAM
MIR1122: 3e-17
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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