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ABOUT THIS RECORD

ID: MNEST001245
species: Hordeum vulgare subsp. spontaneum
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare subsp. spontaneum Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCTGTAAACTAATATAAGAG

miRNA*
CTTATATTAGTTTACGGAGGG

mismatches: 0
bulges: 0

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pre-miRNA
TCTTTTTTTAACAAATACTCCCTCTGTAAACTAATATAAGAGTGTTTAGATTACTAAAATAGTGTTCTAAATGCTCTTATATTAGTTTACGGAGGGAGTA
CTTTAGCACGTTAG


dot-bracket secondary structure
...............(((((((((((((((((((((((((((((((((((.(((((...))))).)))))))))))))))))))))))))))))))))))
..............



SIMILARITIES
miRBase tae-MIR1121: 3e-20

PMRD tae-miR1121: 3e-20

microPC no hits
UniProt no hits

RFAM MIR1122: 4e-35
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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