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ABOUT THIS RECORD

ID: MNEST001260
species: Hordeum vulgare subsp. spontaneum
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare subsp. spontaneum Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATTTTGGGACGGAGGGAGT

miRNA*
TCCCTCCCGTGCCCAAAATAAGT

mismatches: 0
bulges: 2

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pre-miRNA
GTTTATTGTATACTCCCTCCCGTGCCCAAAATAAGTGAGTCACTTATTTTGGGACGGAGGGAGTATTAGATTGT

dot-bracket secondary structure
....(((..(((((((((((.((.(((((((((((((...))))))))))))))))))))))))))..)))...


SIMILARITIES
miRBase osa-MIR1862e: 0.000003

PMRD hpr-miR1120: 0.00000000006

microPC miR1439: 4e-27
UniProt no hits

RFAM MIR1122: 0.000000001
most similar mature miRNAs

Identical with: miR1439 from microPC (MNEST046048)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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