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ABOUT THIS RECORD
ID:
MNEST001264
species:
Hordeum vulgare subsp. spontaneum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare subsp. spontaneum
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTACTCCCTCCGTTCCTTAA
miRNA*
TAGGAACGGAGGGAGCAGTTT
mismatches:
5
bulges:
0
View larger
pre-miRNA
TTAAGAGTATATGCATTGCTA
TGTACTCCCTCCGTTCCTTAA
CATACCTGGGTTCATATCTGGGTTCCTTAACATATCTGGGATCGATCGTATGCATATA
CTCTTATATATTCGAAAGATACCTGGGTTCTTTCATATATGTATATGCATATACTCGTATATT
TAGGAACGGAGGGAGCAGTTT
GTACATAATA
dot-bracket secondary structure
.......(((.((((..(((.
....((((((((((((((.((
.((((((((((....))))))))((((..........)))).(((..(((((((((((
(...(((((....((((((.........))))))))))).))))))))))))..))).)).))
.)))))))))))))).))).)
))).)))...
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11316-akr
:
0.0002
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.0007
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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