ABOUT THIS RECORDspecies: Jatropha curcas
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Jatropha curcas Jatropha Jatropheae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTT miRNA* GATCATGTGGCAGCTTCACC mismatches: 1 bulges: 1 |
pre-miRNA
ACACTATCAGTTGAAGCTGCCAGCATGATCTTAACCTTCCTCCATAGTTGAGGAAAGATCAGATCATGTGGCAGCTTCACCCGTTGTGG
dot-bracket secondary structure
.(((.......(((((((((((.((((((((.....((((((.......)))))).....)))))))))))))))))))......))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACACTATCAGTTGAAGCTGCCAGCATGATCTTAACCTTCCTCCATAGTTGAGGAAAGATCAGATCATGTGGCAGCTTCACCCGTTGTGG
dot-bracket secondary structure
.(((.......(((((((((((.((((((((.....((((((.......)))))).....)))))))))))))))))))......))).
SIMILARITIES| miRBase ptc-MIR167g: 8e-26 PMRD ptc-miR167g: 8e-26 microPC miR167: 0.00000000000002 | UniProt no hits RFAM MIR167_1: 4e-28 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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