miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST001283
species:
Jatropha curcas
miRNA family:
MIR167
source:
miRNEST
Taxonomy by NCBI:
Jatropha curcas
Jatropha
Jatropheae
Crotonoideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGATCATGTGGCAGCTTCACC
miRNA*
TGAAGCTGCCAGCATGATCTTA
mismatches:
2
bulges:
1
View larger
pre-miRNA
AACACTATCAGT
TGAAGCTGCCAGCATGATCTTA
ACCTTCCTCCATAGTTGAGGAAAGATC
AGATCATGTGGCAGCTTCACC
CGTTGTGGT
dot-bracket secondary structure
..(((.......
(((((((((((.((((((((..
...((((((.......)))))).....
)))))))))))))))))))..
....)))..
SIMILARITIES
miRBase
ptc-MIR167g
:
9e-26
PMRD
ptc-miR167g
:
9e-26
microPC
miR167
:
0.00000000000002
UniProt
no hits
RFAM
MIR167_1: 4e-28
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record