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ABOUT THIS RECORD

ID: MNEST001283
species: Jatropha curcas
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Jatropha curcas Jatropha Jatropheae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGATCATGTGGCAGCTTCACC

miRNA*
TGAAGCTGCCAGCATGATCTTA

mismatches: 2
bulges: 1

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pre-miRNA
AACACTATCAGTTGAAGCTGCCAGCATGATCTTAACCTTCCTCCATAGTTGAGGAAAGATCAGATCATGTGGCAGCTTCACCCGTTGTGGT

dot-bracket secondary structure
..(((.......(((((((((((.((((((((.....((((((.......)))))).....)))))))))))))))))))......)))..


SIMILARITIES
miRBase ptc-MIR167g: 9e-26

PMRD ptc-miR167g: 9e-26

microPC miR167: 0.00000000000002
UniProt no hits

RFAM MIR167_1: 4e-28
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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