ABOUT THIS RECORDspecies: Juglans hindsii x Juglans regia
miRNA family: MIR2004
source: miRNEST
Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGTTTTTATTTTATTTTAT miRNA* AAAAAAAAAAAAAAAAAAAAA mismatches: 4 bulges: 0 |
pre-miRNA
CTTTTATTTTATTTGTTTTTATTTTATTTTATTTAGTTTGGAATCTAATTTGTAGAATGGCCTAAACGTCGCCTTCTTCAATTATAATAAATTAAAGAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA
dot-bracket secondary structure
.((((.((((.(((.(((((.((((.((((.(((((((((.........(((.((((.(((.........))))))).)))......))))))))).)))
).)))).))))).))).)))).))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CTTTTATTTTATTTGTTTTTATTTTATTTTATTTAGTTTGGAATCTAATTTGTAGAATGGCCTAAACGTCGCCTTCTTCAATTATAATAAATTAAAGAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA
dot-bracket secondary structure
.((((.((((.(((.(((((.((((.((((.(((((((((.........(((.((((.(((.........))))))).)))......))))))))).)))
).)))).))))).))).)))).))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
