miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST001289
species: Juglans hindsii x Juglans regia
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTA

miRNA*
GATCATATGGCAGCTTCACC

mismatches: 2
bulges: 1

View larger
pre-miRNA
TACGGCCTGCTTCTCGTGCACCACTAGCAGTTGAAGCTGCCAGCATGATCTAAACTTTCTTCTCGATTAATCAAGGAAAGATCGGATCATATGGCAGCTT
CACC
TGTTGATGGAATCACGAAAAACCCAGAA


dot-bracket secondary structure
......(((.((.(((((..(((.((((((.(((((((((((..(((((((...(((((((............)))))))...))))))).)))))))))
)).)
))))).)))...))))).))...)))..



SIMILARITIES
miRBase tcc-MIR167a: 7e-18

PMRD sly-miR167: 3e-17

microPC miR167: 1e-34
UniProt no hits

RFAM MIR167_1: 0.00000000000003
most similar mature miRNAs

Identical with: miR167 from microPC (MNEST045795)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;