ABOUT THIS RECORDspecies: Juglans hindsii x Juglans regia
miRNA family: MIR773
source: miRNEST
Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTGATTCCAGTTTTTGTCTT miRNA* AGCTAAGATTGAGAAAGCAGGAA mismatches: 3 bulges: 2 |
pre-miRNA
CAGCCGAAGTTCTTGATTCCAGTTTTTGTCTTCCAATAGGGAAAGCTAAGATTGAGAAAGCAGGAAAGGATGTG
dot-bracket secondary structure
((.((....((((((.((((((((((.((.((((.....)))).)).))))))).)))..)))))).)).))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CAGCCGAAGTTCTTGATTCCAGTTTTTGTCTTCCAATAGGGAAAGCTAAGATTGAGAAAGCAGGAAAGGATGTG
dot-bracket secondary structure
((.((....((((((.((((((((((.((.((((.....)))).)).))))))).)))..)))))).)).))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q38799|ODPB_ARATH: 0.0002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
